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REQUIREMENTS FOR THE Ph.D. IN GENETICS

First Year Students

Unless individual circumstances warrant, all students entering the Genetics doctoral program take similar courses their first year:

Fall:

GENE 533 – Human Genetics (3 units)
GENE 568 – Nucleic Acids (4 units)
GENE 500 – Computer Concepts + Perl Programming (3 units)
GENE 795A – Lab Research Rotations (2 units, 1 ea with 2 faculty)
PHCL 585B – Strategies, Skills & Ethics (2 units) - optional

For a total of 12 – 14 credit hours

Spring:

GENE 670 – Recent Advances in Genetics (2 units)
GENE 516 – Bioinformatics & Genomics (3 units)
GENE 795A – Lab Research Rotation (1 unit with 3 rd faculty member)

GENE 546 – Advanced Genetics (4 units) –OR-
PL S 528R – Microbial Genetics (3 units)

GENE 509C – Statistics for Research (3 units) –OR-
RNR 613 – Applied Biostatistics (4 units) –
if Statistics not taken as an undergraduate

MCB 695E – Ethics (1) –OR- SP H 649 Survival Skills & Ethics (3 units)
if Ethics course not taken in Fall

For a total of 10 – 16 credit hours

 

Congratulations to Atlantis Russ (Hawaii) and Jason Pugh (Arizona), who will be joining the Genetics GIDP as doctoral students in fall 2008. Both were also awarded a prestigious Science Foundation Arizona Fellowship, which will support the first two years of their education.

(Re)Newed Course fall 2008: GENE 533, Human Genetics. A team taught, 3 unit course covering basic genetic theory and techniques, as applied to the human species, as well as methods of analysis of genetic and environmental variation among individuals and populations.

Genetics Faculty in the News: Dr. Fernando Martinez, Dr. Joyce Schroeder, & Dr. Cari Soderlund.

Year Two

A Major Professor (who will be the student's advisor and normally directs the student's dissertation research) should be chosen by the end of the first year in residence. At the beginning of the second year the doctoral student, in conjunction with their Major Professor, will chose a Dissertation Committee.  This committee is comprised of at least five members: the Major Professor plus two other members of the Committee on Genetics and two members from the student's minor area of study, if applicable.  The Dissertation Committee advises the student, helps plan and approves the Doctoral Degree Study Program, and evaluates the student's progress during all phases of his/her training.

After the student has a  Dissertation Director, additional curriculum supervision is provided by the student's Dissertation Committee.  This committee makes every effort to tailor the student's course work to his/her individual needs. A Course Requirement Worksheet can be found in the Handbook to assist students and their major professors with drafting the Plan of Study.

Minimum Units for Graduation

The following is a summary of some the general requirements for all Ph.D. degrees at the University of Arizona.  Students are responsible for determining that their program meets all the current requirements set by the Graduate College.

The minimum number of units required by the Graduate College for the Ph.D. is 63 units after the Bachelor's degree. Of these 63 units, 36 units of coursework, plus 18 units of dissertation for a total of 54 units, must be in the major (Genetics).  All required courses must be graduate level courses, numbered 500 or above.  At least one-half of the graduate credit must be in courses in which regular grades (A, B, ...) are earned.

 At least 30 of the above units must be taken at The University of Arizona to meet the residency requirement.  More than half of the 36 units in the major must be graded (A,B,C, etc.).

 Units for the Minor vary according to the requirements of the Minor Department, usually requiring 9 to 15 units.  A maximum of 6 units of 400-level courses may be used in the minor area (with approval).  These courses may be used to satisfy total number of units, but will not receive graduate credit and will not be calculated in the graduate GPA.

Within these requirements set by the Graduate College, the actual number of graduate units required is determined by the student's Dissertation Committee.  This course program must be submitted and approved by the Graduate Council on the Doctoral Application to Candidacy.

Course Requirements

All Ph.D. students majoring in Genetics or students from other programs minoring in genetics are required to take the following core courses:

1.

GENE 545, Concepts in Genetic Analysis (3 units)

 
 

    -OR-

 
 

PL S 627, Advanced Genetics (4 units)

 
     

2.

GENE 568, Nucleic Acids (4 units)  

3.

GENE 520, History of Genetics (1 unit)

 
4.

MCB 695E, Ethics (1 unit)
    – OR-
PHCL 595B Scientific Writing Strategies,
Skills & Ethics (2 units)
    – OR-
SP H 649 Survival Skills & Ethics (3 units)


In addition to the core, a minimum of one course from each of the three following subject areas should be taken:

A. Molecular Genetics

B. Population and Evolutionary Genetics

C. Quantitative Methods

The student and his/her committee should decide jointly which courses beyond the core would be appropriate. Below is a list of courses approved for this purpose; other courses can be submitted with the approval of the Genetics Executive Committee. Incoming students are expected to have taken an undergraduate statistics course -- if not, Math 509C Statistics for Research is required.


A. Quantitative Methods

GENE 509C Statistics for Research (3 units)
GENE 513 Quantitative Genetics (3 units)
*GENE 516 Bioinformatics and Genomic Analysis (3 units)
FSHD 577 Genetic Basis of Normal and Deviant Traits (3 units)
*ECOL 553 Functional and Evolutionary Genomics (4 units)
AN S 553 Statistics for Applied Biological Experiments (3 units)
      * = must take one of these as PhD degree requirements.

B. Population and Evolutionary Genetics

GENE 513 Quantitative Genetics (3 units)
ECOL 525 Speciation (2 units)
ECOL 526 Population Genetics (3 units)

C. Molecular Genetics

PED 501 Molecular and Medical Genetics (3 units)
GENE 570 Molecular Genetics and Evolution (3 units)
BIOC 574 Advances in Mammalian Genetics (2 units)
GENE 695c Human Genetic Disease Colloquium (2 units)
MCB 572 Cell Regulation (3 units)
OB G 533 Human Genetics (3 units)

Teaching Requirement

All students are required to serve as Graduate Teaching Assistants for at least two semesters (can be waived to 1 semester with committee approval, if relevant TA ships are unavailable.)

Rotations

All first year students complete three rotations in different laboratories. At least two of the three research rotations should be completed with Genetics faculty. These rotations are selected by the incoming student, with advice from the Genetics Program Director and Executive Committee, based on their research interests. The rotations expose the student to a number of research areas and methods, as well as allowing students to sample labs to assist in the student's choice of a dissertation advisor. Prior to performing a rotation, the student should meet with the prospective mentor to discuss the nature of the rotation. A brief (one page) report of what was accomplished in each rotation must be submitted to the Program at the end of each rotation, signed by the student and rotation faculty, before a grade can be assigned.

Comprehensive Exam

This exam consists of both comprehensive written and oral portions in the major.  It is intended to test the student's fundamental knowledge of genetics and their ability to apply this knowledge to problems. The written portion will consist of a research proposal. The proposal will be in the NIH or NSF format, except that it will stress concepts and background as opposed to experimental details. The topic and abstract must be approved in advance by the student's dissertation committee; it must involve aspects of both the major and minor fields, and must address a different problem than the student's dissertation research.

Final Examination

After all degree requirements have been satisfied and the penultimate draft of the dissertation has been approved by the Dissertation Committee, the candidate must present a formal, public, oral presentation of the dissertation, followed by a closed session of questioning and discussion with the student’s committee.

 
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